BMC check details<

BMC Genomics 2012, 13:32.PubMedCrossRef 45. Lienau EK, Strain E, Wang C, Zheng J, Ottesen AR, Keys CE, Hammack TS, Musser SM, Brown EW, Allard MW, Cao G, Meng J, Stones R: Identification selleck chemicals of a salmonellosis outbreak by means of molecular sequencing. N Engl J Med 2011,364(10):981–982.PubMedCrossRef 46. Okoro CK, Kingsley RA, Quail MA, Kankwatira AM, Feasey NA, Parkhill J, Dougan G, Gordon MA: High-resolution single nucleotide polymorphism analysis distinguishes recrudescence and reinfection in recurrent invasive nontyphoidal Salmonella

Typhimurium disease. Clin Infect Dis 2012, 54:955–963.PubMedCrossRef 47. Leekitcharoenphon P, Lukjancenko O, Friis C, Aarestrup FM, Ussery DW: Genomic variation in Salmonella enterica core genes for epidemiological typing. BMC Genomics 2012, 13:88.PubMedCrossRef 48. Köser XAV-939 purchase C, Ellington M, Cartwright E: Routine use of microbial whole genome sequencing in diagnostic and public health microbiology. PLoS Pathog 2012, 8:e1002824.PubMedCrossRef 49. Kaldhone P, Nayak R, Lynne AM, David DE, McDermott PF, Logue CM, Foley SL: Characterization of Salmonella enterica serovar Heidelberg from turkey-associated sources. Appl Environ Microbiol 2008, 74:5038–5046.PubMedCrossRef 50. Xi M, Zheng J, Zhao S, Brown EW, Meng J: An enhanced discriminatory pulsed-field

gel electrophoresis scheme for subtyping Salmonella serotypes Heidelberg, Kentucky, SaintPaul, and Hadar. J Food Prot 2008, 71:2067–2072.PubMed 51. Zheng J, Keys CE, Zhao S, Meng J, Brown EW: Enhanced subtyping scheme for Salmonella Enteritidis. Emerg Infect Dis 2007, 13:1932–1935.PubMedCrossRef

52. Hyytiä-Trees EK, Cooper K, Ribot EM, Gerner-Smidt P: Recent developments and PLEKHM2 future prospects in subtyping of foodborne bacterial pathogens. Future Microbiol 2007, 2:175–185.PubMedCrossRef 53. Sandt CH, Krouse DA, Cook CR, Hackman AL, Chmielecki WA, Warren NG: The key role of pulsed-field gel electrophoresis in investigation of a large multiserotype and www.selleckchem.com/products/z-ietd-fmk.html multistate food-borne outbreak of Salmonella infections centered in Pennsylvania. J Clin Microbiol 2006, 44:3208–3212.PubMedCrossRef 54. Hunter PR, Gaston MA: Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity. J Clin Microbiol 1988, 26:2465–2466.PubMed Competing interests The authors declare that they have no competing interests. Authors’ contributions NS designed, coordinated and carried out the experiments and bioinformatics analyses and wrote the manuscript. CS isolated bacterial cultures and did the PFGE. MD and RB participated in the CRISPR alignment analysis. ED conceived of the study, participated in the design and coordination of the study and helped to write the manuscript. All authors read and approved the final manuscript.

Comments are closed.